Solid-genotyper

About the Software

Solid-genotyper is a SNP discovery and genotyping tool for high coverage SOLiD data. This tool combines a logistics regression model and heuristics methods to characterize systematic sequencing error and overcome mapping bias issue.

Authors: Jin Yu and Fuli Yu

© Baylor College of Medicine Human Genome Sequencing Center. All rights reserved.

System Requirements

Unix-like operation systems

License

This software is free for all uses with the following restrictions:

  • No part of this software, or modifications thereof, may be redistributed for any purpose to any other company, person, or individual, without prior written permission from the author.

  • This software is provided AS IS. Baylor College of Medicine assumes no responsibility or liability for damages of any kind that may result, directly or indirectly, from the use of this software.

  • The above copyright notice must be preserved in the executable about dialog or made visible to users in some other way.

Download

By downloading this software you explicitly agree to the license terms above.

Draft release version 0.1 (01-26-2011):

    •    Version 0.1 software
    •    Methods (slides in PDF)

Release History

Draft release version 0.1 (01-26-2011):
    •    Initial implementation

Contact

For additional information, contact Jin Yu and Fuli Yu.