Atlas Whole Genome Assembly Suite A suite of software tools for the assembly of large genomes.
Atlas Visualization Tools Visualization tools in support of large-scale assembly.
Bang. A fast, easy to use, repeat supressing search tool.
CBT++ A collection of C++ classes to aid the development of computational biology applications.
BCM Trace Viewer A Java application/applet to display .scf traces and phred quality values.
BCM Java Alignment Viewer A Java application/applet to view sequence alignment files.
HGSC Apollo Adapter A custom MySQL/GAMEXML adapter for Apollo Annotation Editor Version 1.3.5
PASH comparison method An efficient large-scale sequence comparison method that uses positional hashing.