Sequence & Mapping Data

Data is available for individual clones through the Sequencing Project Browser, our table of Large Contigs, or by map region. Sequence data is found on all pages by clicking on the accession# to reach the GenBank entry or the project name to retreive the FASTA file from our FTP site. Please read about the limitations on the use of the sequence data. The sequence data available through these web pages are updated automatically and represent all known contigs greater than 2kb in length.

Information regarding our draft submissions to Genbank is available here.

Sequence Data

Sequencing Project Browser
This browser allows you to view all sequencing projects, search by project or clone name, and/or view a select group of projects.

Table of Large Finished Contigs.

Fast access to frequently requested pages:

[All Projects]

[All Human] [Human 12p] [Human 12q] [Human 3p] [Human 3q] [Human Xp] [Human Xq]

[All Mouse] [Mouse 6] [Mouse X] [Mouse Yp]

[All Rat]

[All cDNA data] [All Drosophila data]

Mapping Data

These links will access a table of sequencing results for the region. Click on the link in the "Location" field to see a map.

• BAC/PAC Clone Tiling Paths
  • These BAC/PAC tiling paths are for chromosomes 3, 12 and part of X
  • They are a dynamic work in progress. Chr. 12 and X paths are relatively
    minimal,whereas the Chr. 3 path is more inclusive.
  
  Please e-mail with any questions.

Here is an overview of sequencing targets.

• Human X Chromosome
  • Ideogram delineating which regions are to be sequenced by various centers.
    
    
  • Xp22 projects with YAC defined Bin maps. (map legend)
    1-7, 8-13, 14-21, 22-29, 30-38, 39-47, 48-56, 57-66, 67-69
    70-78, 79-86, 87-93, 94-99, 100-108, 109-117, 118-125, 126-134
    135-142, 143-149, 150-158, 159-167, 168-174, 175-180, 181-183
    
    
  • Xq28 map.
    

• Human Chromosome 3 -- Mapping data provided by The University of Texas Health Science Center at San Antonio , including seed clones chosen for draft sequencing.
  • Ideogram contig production on chromosome 3.
  • 3p22
  • 3p21.3
  • 3p21.1
    
  • 3p22 Contig maps Contig 7 Contig 8
    
  • 3p21.3 Contig maps Contig 1 Contig 3 Contig 4
    
  • 3p21.1 Contig map linked to sequencing results Contig 9
    

• Human Chromosome 12 -- Mapping data for chromosome 12 provided by Albert Einstein College of Medicine
  • 12p0.0-17.9 (maps only)
  • 12p21.3-41.2 (maps only)
    
  • 12p42.9-54.4 (maps only)
    
  • 12q55.0-65.3 (maps only)
    
  • 12q66.8-71.2 (maps only)
    
  • 12q72.9-83.0 (maps only)
  • 12q84.2-95.0 (maps only)
  • 12q95.8-113.3 (maps only)
  • 12q115.5-122.8 (maps only)
  • 12q123.9-169.1 (maps only)
    

• Mouse Chromosome Y -- Mapping data for Mouse Chromosome Y.

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